Researcher Database

Hiromi Watari
Faculty of Fisheries Sciences Marine Life Science Marine Bioresources Chemistry
Assistant Professor

Researcher Profile and Settings

Affiliation

  • Faculty of Fisheries Sciences Marine Life Science Marine Bioresources Chemistry

Job Title

  • Assistant Professor

URL

Research funding number

  • 30962758

ORCID ID

J-Global ID

Research Interests

  • サイトカイン受容体   海洋天然物   レクチン   トロンボポエチン受容体   カイメン   生理活性物質   

Research Areas

  • Life sciences / Molecular biology
  • Life sciences / Marine/Aquatic life sciences

Educational Organization

Academic & Professional Experience

  • 2020/04 - 2022/03 日本学術振興会 特別研究員DC2

Education

  • 2019/04 - 2022/03  Hokkaido University  Graduate School of Fisheries Sciences  Division of Marine Life Science
  • 2017/04 - 2019/03  Hokkaido University  Graduate School of Fisheries Sciences
  • 2013/04 - 2017/03  Hokkaido University  School of Fisheries Sciences  Department of Marine Bioresources Chemistry

Research Activities

Published Papers

  • Ryuichi Sakai, Ken Matsumura, Hajime Uchimasu, Kei Miyako, Tohru Taniguchi, V Raghavendra Rao Kovvuri, Anjana Delpe Acharige, Kenneth G Hull, Daniel Romo, Lakkana Thaveepornkul, Sarin Chimnaronk, Hiroko Miyamoto, Ayato Takada, Hiromi Watari, Masaki J Fujita, Jiro Sakaue
    The Journal of organic chemistry 2024/04/01 
    Mellpaladines A-C (1-3) and dopargimine (4) are dopamine-derived guanidine alkaloids isolated from a specimen of Palauan Didemnidae tunicate as possible modulators of neuronal receptors. In this study, we isolated the dopargimine derivative 1-carboxydopargimine (5), three additional mellpaladines D-F (6-8), and serotodopalgimine (9), along with a dimer of serotonin, 5,5'-dihydroxy-4,4'-bistryptamine (10). The structures of these compounds were determined based on spectrometric and spectroscopic analyses. Compound 4 and its congeners dopargine (11), nordopargimine (15), and 2-(6,7-dimethoxy-3,4-dihydroisoquinolin-1-yl)ethan-1-amine (16) were synthetically prepared for biological evaluations. The biological activities of all isolated compounds were evaluated in comparison with those of 1-4 using a mouse behavioral assay upon intracerebroventricular injection, revealing key functional groups in the dopargimines and mellpaladines for in vivo behavioral toxicity. Interestingly, these alkaloids also emerged during a screen of our marine natural product library aimed at identifying antiviral activities against dengue virus, SARS-CoV-2, and vesicular stomatitis Indiana virus (VSV) pseudotyped with Ebola virus glycoprotein (VSV-ZGP).
  • Kenji Morokuma, Hiromi Watari, Maika Mori, Ryuichi Sakai, Raku Irie, Masato Oikawa
    Tetrahedron 133623 - 133623 0040-4020 2023/08
  • Hiromi Watari, Reimi Kishi, Satoko Matsunaga, Takayuki Nishikawa, Yuji Sawada, Akito Honda, Masaki J Fujita, Ryuichi Sakai
    Chemistry Letters 52 (3) 185 - 189 0366-7022 2023/03/05 [Refereed]
  • Hiromi Watari, Hiromu Kageyama, Nami Masubuchi, Hiroya Nakajima, Kako Onodera, Pamela J. Focia, Takumi Oshiro, Takashi Matsui, Yoshio Kodera, Tomohisa Ogawa, Takeshi Yokoyama, Makoto Hirayama, Kanji Hori, Douglas M. Freymann, Misa Imai, Norio Komatsu, Marito Araki, Yoshikazu Tanaka, Ryuichi Sakai
    Nature Communications 13 (1) 7262 - 7262 2022/11/25 [Refereed]
     
    Abstract N-glycan-mediated activation of the thrombopoietin receptor (MPL) under pathological conditions has been implicated in myeloproliferative neoplasms induced by mutant calreticulin, which forms an endogenous receptor-agonist complex that traffics to the cell surface and constitutively activates the receptor. However, the molecular basis for this mechanism is elusive because oncogenic activation occurs only in the cell-intrinsic complex and is thus cannot be replicated with external agonists. Here, we describe the structure and function of a marine sponge-derived MPL agonist, thrombocorticin (ThC), a homodimerized lectin with calcium-dependent fucose-binding properties. In-depth characterization of lectin-induced activation showed that, similar to oncogenic activation, sugar chain-mediated activation persists due to limited receptor internalization. The strong synergy between ThC and thrombopoietin suggests that ThC catalyzes the formation of receptor dimers on the cell surface. Overall, the existence of sugar-mediated MPL activation, in which the mode of activation is different from the original ligand, suggests that receptor activation is unpredictably diverse in living organisms.
  • Hiromi Watari, Hiromu Kageyama, Nami Masubuchi, Hiroya Nakajima, Kako Onodera, Pamela Focia, Takumi Oshiro, Takashi Matsui, Yoshio Kodera, Tomohisa Ogawa, Takeshi Yokoyama, Makoto Hirayama, Kanji Hori, Douglas Freymann, Norio Komatsu, Marito Araki, Yoshikazu Tanaka, Ryuichi Sakai
    2022/04/01
  • Hiromi Watari, Hiromu Kageyama, Nami Masubuchi, Hiroya Nakajima, Kako Onodera, Pamela J. Focia, Takumi Oshiro, Takashi Matsui, Yoshio Kodera, Tomohisa Ogawa, Takeshi Yokoyama, Makoto Hirayama, Kanji Hori, Douglas M. Freymann, Norio Komatsu, Marito Araki, Yoshikazu Tanaka, Ryuichi Sakai
    2021/10/29 
    ABSTRACT N-glycan-mediated activation of the thrombopoietin receptor (MPL) under pathological conditions has been implicated in myeloproliferative neoplasms induced by mutant calreticulin, which forms an endogenous receptor-agonist complex that constitutively activates the receptor. However, the molecular basis for this mechanism has not been studied because no external agonists existed. We describe the structure and function of a marine sponge-derived MPL agonist, thrombocorticin (ThC), a homodimerized lectin with calcium-dependent fucose-binding properties. ThC-induced activation persists due to limited receptor internalization. The strong synergy between ThC and thrombopoietin suggests that ThC catalyzes the formation of receptor dimers on the cell surface. MPL is subject to sugar-mediated activation, where the kinetics differ from those of cytokines. This result suggests the presence of diverse receptor activation pathways in human thrombopoiesis. One-sentence summary A marine sponge lectin catalyzes thrombopoietin receptor dimerization and activation, exhibiting strong synergy with thrombopoietin, and modulates internalization of the receptor.
  • Hiromi Watari, Hiroya Nakajima, Wataru Atsuumi, Takanori Nakamura, Takeshi Nanya, Yuji Ise, Ryuichi Sakai
    Comparative Biochemistry and Physiology Part C: Toxicology & Pharmacology 221 82 - 88 1532-0456 2019/07 [Refereed]

MISC

  • Cytological effects of a novel sponge derived protein toxin, soritesidine
    Hiromi Watari, Masaya Kitano, Yuri Ishibashi, Ryuichi Sakai  The 38th Symposium on Natural Products  2023/10
  • MECHANISM OF CYTOKINE RECEPTOR ACTIVATION BY MARINE SPONGE LECTIN
    Hiromi Watari, Hiroki Kageyama, Nami Masubuchi, Marito Araki, Yoshikazu Tanaka, Ryuichi Sakai  ECMNP-MaNaPro 2023  2023/09
  • 受容体の新規活性化機構を掘り起こす海洋天然物
    辺浩美  第15回化学生態学研究会  2023/06  [Invited]
  • 海綿由来レクチン ThC によるサイトカイン受容体 新規活性化機構の解明
    令和4年度 日本農芸化学会 北海道・東北支部 合同支部会  2022/09
  • 海綿由来レクチンをプローブとしたサイトカイン受容体 新規活性化機構の解明
    第64回天然有機化合物討論会  2022/09
  • Activation of thrombopoietin receptor by sponge derived protein: A Novel mechanism of activation of c-Mpl
    Pacifichem 2021  2021/12
  • 辺浩美, 影山大夢, 中島寛弥, 小野寺かこ, 増渕菜弥, 大城拓未, 松井崇, 小寺義男, 小川智久, 平山真, 堀貫治, 横山武司, 小松則夫, 小松則夫, 荒木真理人, 荒木真理人, 田中良和, 酒井隆一  日本血液学会学術集会抄録(Web)  83rd-  2021

Research Grants & Projects

  • 日本学術振興会:科学研究費助成事業 若手研究
    Date (from‐to) : 2023/04 -2026/03 
    Author : 辺 浩美
  • Sugar mediated activation of cytokine receptor by marine sponge-derived lectin
    Japan Society for the Promotion of Science:Grants-in-Aid for Scientific Research Grant-in-Aid for Research Activity Start-up
    Date (from‐to) : 2022/08 -2024/03 
    Author : 辺 浩美
  • Japan Society for the Promotion of Science:Grants-in-Aid for Scientific Research Grant-in-Aid for JSPS Fellows
    Date (from‐to) : 2020/04 -2022/03 
    Author : 辺 浩美
     
    トロンボコルチシン(ThC)はミクロネシア産海綿Corticium sp.から得られた新規タンパク質である。ThCは血小板分化に関わるサイトカイン、トロンボポエチン(TPO)の受容体に作用しTPOと類似した活性を示したが、その詳細は不明であった。 今年度の本研究では、ThCはどのようにTPO受容体へ作用しているのか?この疑問の答えの一端を捉えることができた。 本研究ではまず、ThCのアミノ酸配列を決定した。Edman分解とMS/MSによるペプチドマスマッピングを用いて全配列を推定したところ、アミノ酸131残基のタンパク質であることが明らかとなった。ThCのアミノ酸配列はTPOとの類似性が無い一方で、バクテリア由来のレクチンと相同性を持つことが分かった。レクチンとは糖と結合するタンパク質の総称である。この結果からThCと糖との結合性を調べたところ、フコースとマンノースに親和性を持ち、細胞培養液にThCと同時に添加するとThCの活性が著しく阻害された。さらに、X線結晶構造解析の結果からThCはフコースとマンノースとの共結晶が得られている。したがって、ThCはTPO受容体の糖鎖に結合することで、活性を発揮しているのではないかという仮説が生じた。
  • リバネス研究費 池田理化再生医療研究奨励賞
    Date (from‐to) : 2019/10 -2020/09


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