論文

• Plasmonic circular dichroism-based metal ion detection using gold nanorod-DNA complexes.
  Yali Shi, Satoshi Nakamura, Hideyuki Mitomo, Yusuke Yonamine, Guoqing Wang, Kuniharu Ijiro
  Chemical communications (Cambridge, England), 60, 82, 11794, 11797, 2024年10月10日, ［査読有り］, ［国際誌］
  英語, 研究論文（学術雑誌）, We report that complexes formed between gold nanorods (AuNRs) and metal-mediated DNA exhibit plasmonic circular dichroism (CD) signals up to ∼400 times stronger than the molecular CD signal of DNA. This substantial enhancement enables the detection of metal ions, offering a promising approach to analytical applications in chiral biochemistry.
• Ultrasensitive Surface-Enhanced Raman Scattering Platform for Protein Detection via Active Delivery to Nanogaps as a Hotspot
  Tianxu Gao, Takehiro Yachi, Xu Shi, Rina Sato, Chikara Sato, Yusuke Yonamine, Kiyoshi Kanie, Hiroaki Misawa, Kuniharu Ijiro, Hideyuki Mitomo
  ACS Nano, American Chemical Society (ACS), 2024年08月02日, ［査読有り］
  研究論文（学術雑誌）
• Dynamic Orientation Control of Gold Nanorods in Polymer Brushes by Their Thickness Changes for Plasmon Switching
  Yu Sekizawa, Yuka Hasegawa, Hideyuki Mitomo, Chisato Toyokawa, Yusuke Yonamine, Kuniharu Ijiro
  Advanced Materials Interfaces, Wiley, 2024年01月10日, ［査読有り］
  研究論文（学術雑誌）, Abstract
  
  Gold nanorods (AuNRs) have unique optical properties such as transverse and longitudinal localized surface plasmon resonance (T‐ and L‐LSPR). As the L‐LSPR absorption depends on the angle of the AuNRs to incident light and polarization, orientational control of AuNRs is a crucial issue. In spite of various techniques to control AuNR orientation, dynamic orientation tuning on a solid substrate remains challenging. Herein, dynamic changes are demonstrated in AuNR orientation in the anionic polymer (DNA) brushes via control of their thickness by salt concentration. AuNRs vertically align toward the substrates when their thickness exceeds the AuNR length. Once their thickness becomes shorter than the AuNR length, the attached AuNRs begin to tilt. The tilt reaches a maximum level close to horizontal when the thickness decreases to half that of the AuNR length. The dynamic control between the vertical (uniform) and tilted (random) orientation of the AuNRs showed not only absorption intensity changes in L‐LSPR but also the switching of side‐by‐side plasmon coupling. The polymer brush‐based system affords a novel platform for the stimuli‐responsive control of AuNR orientation on the substrates via changes in the thickness of polymer brushes for actively tunable plasmonic substrates.
• Hysteresis in the Thermo-Responsive Assembly of Hexa(ethylene glycol) Derivative-Modified Gold Nanodiscs as an Effect of Shape
  Joshua Chidiebere Mba, Hideyuki Mitomo, Yusuke Yonamine, Guoqing Wang, Yasutaka Matsuo, Kuniharu Ijiro
  NANOMATERIALS, 12, 9, 2022年05月, ［査読有り］
  英語, 研究論文（学術雑誌）
• Core-Gap-Shell Nanoparticles@Polyaniline with TunablePlasmonic Chiroptical Activities by pH and Electric Potential Dual Modulation
  Han Lin, Hideyuki Mitomo, Yusuke Yonamine, Zhiyong Guo, Kuniharu Ijiro
  CHEMISTRY OF MATERIALS, 34, 9, 4062, 4072, 2022年05月, ［査読有り］
  英語, 研究論文（学術雑誌）
• Self-assembly of Gold Nanorods into a Highly Ordered Sheet via Electrostatic Interactions with Double-stranded DNA
  Satoshi Nakamura, Hideyuki Mitomo, Shigeaki Suzuki, Yu Torii, Yu Sekizawa, Yusuke Yonamine, Kuniharu Ijiro
  CHEMISTRY LETTERS, 51, 5, 529, 532, 2022年05月, ［査読有り］
  英語, 研究論文（学術雑誌）
• Probing the Biogenesis of Polysaccharide Granules in Algal Cells at Sub-Organellar Resolution via Raman Microscopy with Stable Isotope Labeling.
  Yusuke Yonamine, Takuya Asai, Yuta Suzuki, Takuro Ito, Yasuyuki Ozeki, Yu Hoshino
  Analytical chemistry, 93, 50, 16796, 16803, 2021年12月21日, ［査読有り］, ［筆頭著者, 責任著者］, ［国際誌］
  英語, 研究論文（学術雑誌）, Phototrophs assimilate CO2 into organic compounds that accumulate in storage organelles. Elucidation of the carbon dynamics of storage organelles could enhance the production efficiency of valuable compounds and facilitate the screening of strains with high photosynthetic activity. To comprehensively elucidate the carbon dynamics of these organelles, the intraorganellar distribution of the carbon atoms that accumulate at specific time periods should be probed. In this study, the biosynthesis of polysaccharides in storage organelles was spatiotemporally probed via stimulated Raman scattering (SRS) microscopy using a stable isotope (13C) as the tracking probe. Paramylon granules (a storage organelle of β-1,3-glucan) accumulated in a unicellular photosynthetic alga, Euglena gracilis, were investigated as a model organelle. The carbon source of the culture medium was switched from NaH12CO3 to NaH13CO3 during the production of the paramylon granules; this resulted in the distribution of the 12C and 13C constituents in the granules, so that the biosynthetic process could be tracked. Taking advantage of high-resolution SRS imaging and label switching, the localization of the 12C and 13C constituents inside a single paramylon granule could be visualized in three dimensions, thus revealing the growth process of paramylon granules. We propose that this method can be used for comprehensive elucidation of the dynamic activities of storage organelles.
• Molecular configuration-mediated thermo-responsiveness in oligo(ethylene glycol) derivatives attached on gold nanoparticles dagger
  Kun Xiong, Hideyuki Mitomo, Xueming Su, Yier Shi, Yusuke Yonamine, Shin-ichiro Sato, Kuniharu Ijiro
  NANOSCALE ADVANCES, 3, 13, 3762, 3769, 2021年07月, ［査読有り］
  英語, 研究論文（学術雑誌）
• Reversible changes in the orientation of gold nanorod arrays on polymer brushes
  Yu Sekizawa, Hideyuki Mitomo, Mizuki Nihei, Satoshi Nakamura, Yusuke Yonamine, Akinori Kuzuya, Takehiko Wada, Kuniharu Ijiro
  NANOSCALE ADVANCES, 2, 9, 3798, 3803, 2020年09月, ［査読有り］
  英語, 研究論文（学術雑誌）
• Raman image-activated cell sorting.
  Nao Nitta, Takanori Iino, Akihiro Isozaki, Mai Yamagishi, Yasutaka Kitahama, Shinya Sakuma, Yuta Suzuki, Hiroshi Tezuka, Minoru Oikawa, Fumihito Arai, Takuya Asai, Dinghuan Deng, Hideya Fukuzawa, Misa Hase, Tomohisa Hasunuma, Takeshi Hayakawa, Kei Hiraki, Kotaro Hiramatsu, Yu Hoshino, Mary Inaba, Yuki Inoue, Takuro Ito, Masataka Kajikawa, Hiroshi Karakawa, Yusuke Kasai, Yuichi Kato, Hirofumi Kobayashi, Cheng Lei, Satoshi Matsusaka, Hideharu Mikami, Atsuhiro Nakagawa, Keiji Numata, Tadataka Ota, Takeichiro Sekiya, Kiyotaka Shiba, Yoshitaka Shirasaki, Nobutake Suzuki, Shunji Tanaka, Shunnosuke Ueno, Hiroshi Watarai, Takashi Yamano, Masayuki Yazawa, Yusuke Yonamine, Dino Di Carlo, Yoichiroh Hosokawa, Sotaro Uemura, Takeaki Sugimura, Yasuyuki Ozeki, Keisuke Goda
  Nature communications, 11, 1, 3452, 3452, 2020年07月10日, ［査読有り］, ［国際誌］
  英語, 研究論文（学術雑誌）, The advent of image-activated cell sorting and imaging-based cell picking has advanced our knowledge and exploitation of biological systems in the last decade. Unfortunately, they generally rely on fluorescent labeling for cellular phenotyping, an indirect measure of the molecular landscape in the cell, which has critical limitations. Here we demonstrate Raman image-activated cell sorting by directly probing chemically specific intracellular molecular vibrations via ultrafast multicolor stimulated Raman scattering (SRS) microscopy for cellular phenotyping. Specifically, the technology enables real-time SRS-image-based sorting of single live cells with a throughput of up to ~100 events per second without the need for fluorescent labeling. To show the broad utility of the technology, we show its applicability to diverse cell types and sizes. The technology is highly versatile and holds promise for numerous applications that are previously difficult or undesirable with fluorescence-based technologies.
• Salt-triggered Active Plasmonic Systems Based on the Assembly/Disassembly of Gold Nanorods in a DNA Brush Layer on a Solid Substrate
  Satoshi Nakamura, Hideyuki Mitomo, Yusuke Yonamine, Kuniharu Ijiro
  CHEMISTRY LETTERS, 49, 7, 749, 752, 2020年07月, ［査読有り］
  英語, 研究論文（学術雑誌）
• Spatiotemporal monitoring of intracellular metabolic dynamics by resonance Raman microscopy with isotope labeling
  Yusuke Yonamine, Kotaro Hiramatsu, Takuro Ideguchi, Takuro Ito, Tomomi Fujiwara, Yoshiko Miura, Keisuke Goda, Yu Hoshino
  RSC ADVANCES, 10, 28, 16679, 16686, 2020年04月, ［査読有り］, ［筆頭著者, 責任著者］
  英語, 研究論文（学術雑誌）
• Homogeneous Oligomeric Ligands Prepared via Radical Polymerization that Recognize and Neutralize a Target Peptide
  Yu Hoshino, Shohei Taniguchi, Hinata Takimoto, Sotaro Akashi, Sho Katakami, Yusuke Yonamine, Yoshiko Miura
  Angewandte Chemie, 132, 2, 689, 693, Wiley, 2020年01月07日
  研究論文（学術雑誌）
• Homogeneous Oligomeric Ligands Prepared via Radical Polymerization that Recognize and Neutralize a Target Peptide.
  Yu Hoshino, Shohei Taniguchi, Hinata Takimoto, Sotaro Akashi, Sho Katakami, Yusuke Yonamine, Yoshiko Miura
  Angewandte Chemie (International ed. in English), 59, 2, 679, 683, 2020年01月07日, ［査読有り］, ［国際誌］
  英語, 研究論文（学術雑誌）, Abiotic ligands that bind to specific biomolecules have attracted attention as substitutes for biomolecular ligands, such as antibodies and aptamers. Radical polymerization enables the production of robust polymeric ligands from inexpensive functional monomers. However, little has been reported about the production of monodispersed polymeric ligands. Herein, we present homogeneous ligands prepared via radical polymerization that recognize epitope sequences on a target peptide and neutralize the toxicity of the peptide. Taking advantage of controlled radical polymerization and separation, a library of multifunctional oligomers with discrete numbers of functional groups was prepared. Affinity screening revealed that the sequence specificity of the oligomer ligands strongly depended on the number of functional groups. The process reported here will become a general step for the development of abiotic ligands that recognize specific peptide sequences.
• Isolating Single Euglena gracilis Cells by Glass Microfluidics for Raman Analysis of Paramylon Biogenesis
  Ota Nobutoshi, Yonamine Yusuke, Asai Takuya, Yalikun Yaxiaer, Ito Takuro, Ozeki Yasuyuki, Hoshino Yu, Tanaka Yo
  ANALYTICAL CHEMISTRY, 91, 15, 9631, 9639, 2019年08月06日, ［査読有り］, ［筆頭著者］, ［国際誌］
  英語, 研究論文（学術雑誌）
• High-throughput label-free molecular fingerprinting flow cytometry
  Kotaro Hiramatsu, Takuro Ideguchi, Yusuke Yonamine, SangWook Lee, Yizhi Luo, Kazuki Hashimoto, Takuro Ito, Misa Hase, Jee-Woong Park, Yusuke Kasai, Shinya Sakuma, Takeshi Hayakawa, Fumihito Arai, Yu Hoshino, Keisuke Goda
  SCIENCE ADVANCES, 5, 1, 2019年01月, ［査読有り］
  英語, 研究論文（学術雑誌）
• Monitoring Photosynthetic Activity in Microalgal Cells by Raman Spectroscopy with Deuterium Oxide as a Tracking Probe
  Yusuke Yonamine, Yuta Suzuki, Takuro Ito, Yoshiko Miura, Keisuke Goda, Yasuyuki Ozeki, Yu Hoshino
  CHEMBIOCHEM, 18, 20, 2063, 2068, 2017年10月, ［査読有り］, ［筆頭著者, 責任著者］
  英語, 研究論文（学術雑誌）
• Conformation Manipulation and Motion of a Double Paddle Molecule on an Au(111) Surface
  We-Hyo Soe, Yasuhiro Shirai, Corentin Durand, Yusuke Yonamine, Kosuke Minami, Xavier Bouju, Marek Kolmer, Katsuhiko Ariga, Christian Joachim, Waka Nakanishi
  ACS NANO, 11, 10, 10357, 10365, 2017年10月, ［査読有り］
  英語, 研究論文（学術雑誌）
• A polymer nanoparticle with engineered affinity for a vascular endothelial growth factor (VEGF(165))
  Hiroyuki Koide, Keiichi Yoshimatsu, Yu Hoshino, Shih-Hui Lee, Ai Okajima, Saki Ariizumi, Yudai Narita, Yusuke Yonamine, Adam C. Weisman, Yuri Nishimura, Naoto Oku, Yoshiko Miura, Kenneth J. Shea
  NATURE CHEMISTRY, 9, 7, 715, 722, 2017年07月, ［査読有り］
  英語, 研究論文（学術雑誌）
• pH-Responsive Cotton Effects in the d-d Transition Band of Self-Assembling Copper(II) Complexes with a Cholesteryl-Armed Ligand
  Takuya Sagami, Shota Umemoto, Yuhei O. Tahara, Makoto Miyata, Yusuke Yonamine, Daisuke Ishikawa, Taizo Mori, Katsuhiko Ariga, Hiroyuki Miyake, Satoshi Shinoda
  BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN, 90, 6, 739, 745, 2017年06月, ［査読有り］
  英語, 研究論文（学術雑誌）
• Mechanically Induced Opening-Closing Action of Binaphthyl Molecular Pliers: Digital Phase Transition versus Continuous Conformational Change
  Taizo Mori, Daisuke Ishikawa, Yusuke Yonamine, Yoshihisa Fujii, Jonathan P. Hill, Izumi Ichinose, Katsuhiko Ariga, Waka Nakanishi
  CHEMPHYSCHEM, 18, 11, 1470, 1474, 2017年06月, ［査読有り］
  英語, 研究論文（学術雑誌）
• Driving nanocars and nanomachines at interfaces: From concept of nanoarchitectonics to actual use in world wide race and hand operation
  Yasuhiro Shirai, Kosuke Minami, Waka Nakanishi, Yusuke Yonamine, Christian Joachim, Katsuhiko Ariga
  JAPANESE JOURNAL OF APPLIED PHYSICS, 55, 11, 2016年11月, ［査読有り］
  英語
• Supramolecular 1-D polymerization of DNA origami through a dynamic process at the 2-dimensionally confined air-water interface
  Yusuke Yonamine, Keitel Cervantes-Salguero, Kosuke Minami, Ibuki Kawamata, Waka Nakanishi, Jonathan P. Hill, Satoshi Murata, Katsuhiko Ariga
  PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 18, 18, 12576, 12581, 2016年05月, ［査読有り］, ［筆頭著者, 責任著者］
  英語, 研究論文（学術雑誌）
• Mechanochemical Tuning of the Binaphthyl Conformation at the Air-Water Interface
  Daisuke Ishikawa, Taizo Mori, Yusuke Yonamine, Waka Nakanishi, David L. Cheung, Jonathan P. Hill, Katsuhiko Ariga
  ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 54, 31, 8988, 8991, 2015年07月, ［査読有り］
  英語, 研究論文（学術雑誌）
• Preparation of nanogel-immobilized porous gel beads for affinity separation of proteins: fusion of nano and micro gel materials
  Yu Hoshino, Yuka Arata, Yusuke Yonamine, Shih-Hui Lee, Aki Yamasaki, Ryousuke Tsuhara, Katsuhiko Yano, Kenneth J. Shea, Yoshiko Miura
  POLYMER JOURNAL, 47, 2, 220, 225, 2015年02月, ［査読有り］
  英語, 研究論文（学術雑誌）
• Yusuke Yonamine, Keitel Cervantes-Salguero, Waka Nakanishi, Ibuki Kawamata, Kosuke Minami, Hirokazu Komatsu, Satoshi Murata, Jonathan P. Hillab, Katsuhiko Ariga.
  Yusuke Yonamine, Keitel Cervantes-Salguero, Waka Nakanishi, Ibuki Kawamata, Kosuke Minami, Hirokazu Komatsu, Satoshi Murata, Jonathan, P. Hillab, Katsuhiko Ariga
  Physical Chemistry Chemical Physics, 17, 32122, 32125, 2015年, ［査読有り］
  英語, 研究論文（学術雑誌）
• Functional nanomaterials prepared by nanoarchitectonics-based supramolecular assembly
  Katsuhiko Ariga, Yusuke Yonamine, Jonathan P. Hill
  NATO Science for Peace and Security Series C: Environmental Security, 139, 45, 61, Springer Verlag, 2015年
  英語, 研究論文（学術雑誌）
• In situ 2D-extraction of DNA wheels by 3D through-solution transport
  Yusuke Yonamine, Keitel Cervantes-Salguero, Waka Nakanishi, Ibuki Kawamata, Kosuke Minami, Hirokazu Komatsu, Satoshi Murata, Jonathan, P. Hillab, Katsuhiko Ariga
  Physical Chemistry Chemical Physics, 17, 48, 32122, 32125, 2015年, ［査読有り］, ［筆頭著者, 責任著者］
  英語, 研究論文（学術雑誌）
• Research Update: Mesoporous sensor nanoarchitectonics
  Katsuhiko Ariga, Yusuke Yamauchi, Qingmin Ji, Yusuke Yonamine, Jonathan P. Hill
  APL MATERIALS, 2, 3, 2014年03月, ［査読有り］
  英語, 研究論文（学術雑誌）
• Layer-by-layer Nanoarchitectonics: Invention, Innovation, and Evolution
  Katsuhiko Ariga, Yusuke Yamauchi, Gaulthier Rydzek, Qingmin Ji, Yusuke Yonamine, Kevin C. -W. Wu, Jonathan P. Hill
  CHEMISTRY LETTERS, 43, 1, 36, 68, 2014年01月, ［査読有り］
  英語
• Nanoarchitectonics of Molecular Aggregates: Science and Technology
  Muruganathan Ramanathan, Kunlun Hong, Qingmin Ji, Yusuke Yonamine, Jonathan P. Hill, Katsuhiko Ariga
  JOURNAL OF NANOSCIENCE AND NANOTECHNOLOGY, 14, 1, 390, 401, 2014年01月, ［査読有り］
  英語
• Epitope Discovery for a Synthetic Polymer Nanoparticle: A New Strategy for Developing a Peptide Tag
  Keiichi Yoshimatsu, Tomohiko Yamazaki, Yu Hoshino, Paul E. Rose, Linda F. Epstein, Les P. Miranda, Philip Tagari, John M. Beierle, Yusuke Yonamine, Kenneth J. Shea
  JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 136, 4, 1194, 1197, 2014年01月, ［査読有り］
  英語, 研究論文（学術雑誌）
• Polymer Nanoparticle-Protein Interface. Evaluation of the Contribution of Positively Charged Functional Groups to Protein Affinity
  Yusuke Yonamine, Keiichi Yoshimatsu, Shih-Hui Lee, Yu Hoshino, Yoshio Okahata, Kenneth J. Shea
  ACS APPLIED MATERIALS & INTERFACES, 5, 2, 374, 379, 2013年01月, ［査読有り］, ［筆頭著者］
  英語, 研究論文（学術雑誌）
• ELISA-Mimic Screen for Synthetic Polymer Nanoparticles with High Affinity to Target Proteins
  Yusuke Yonamine, Yu Hoshino, Kenneth J. Shea
  BIOMACROMOLECULES, 13, 9, 2952, 2957, 2012年09月, ［査読有り］, ［筆頭著者］
  英語, 研究論文（学術雑誌）
• Light-Triggered Charge Reversal of Organic-Silica Hybrid Nanoparticles
  Li-Chih Hu, Yusuke Yonamine, Shih-Hui Lee, Wytze E. van der Veer, Kenneth J. Shea
  JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 134, 27, 11072, 11075, 2012年07月, ［査読有り］
  英語, 研究論文（学術雑誌）
• Temperature-Responsive "Catch and Release" of Proteins by using Multifunctional Polymer-Based Nanoparticles
  Keiichi Yoshimatsu, Benjamin K. Lesel, Yusuke Yonamine, John M. Beierle, Yu Hoshino, Kenneth J. Shea
  ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 51, 10, 2405, 2408, 2012年, ［査読有り］
  英語, 研究論文（学術雑誌）
• Covalent Modification of DNA with Azetidinium Lipids
  Yusuke Yonamine, Takayoshi Kawasaki, Yoshio Okahata
  CHEMISTRY LETTERS, 39, 2, 84, 85, 2010年02月, ［査読有り］, ［筆頭著者］
  英語, 研究論文（学術雑誌）
• Photochromism and chirality propagation of chromene amphiphile aggregates in aqueous ethanol solutions
  Takayoshi Kawasaki, Sayaka Horie, Kentarou Asaoka, Yuichi Manaka, Yusuke Yonamine, Yoshio Okahata
  CHEMISTRY LETTERS, 36, 8, 1048, 1049, 2007年08月, ［査読有り］
  英語, 研究論文（学術雑誌）